PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma2g01700.1
Common NameZOSMA_2G01700
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bHLH
Protein Properties Length: 343aa    MW: 38402.1 Da    PI: 6.1826
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma2g01700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.7e-09244287755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+      +K++ +++LekA+ Y+k Lq
  Zosma2g01700.1 244 IAAKNRRERISERLKVLQELVPNG-----TKVDLVTMLEKATSYVKFLQ 287
                     5679******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.818237286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.19E-10238291No hitNo description
SuperFamilySSF474599.16E-13238296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-11239295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-11243292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-6245287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MALDNFIHTN MFDEHLLGGR DFVSPALFDL MNQTSCEVER SGTVNYSSDP FAQLLPNFHL  60
NSSTSHNRWN ELQLHPCIDS PTILADDHLH QRNSVLSFGG NGCNYPCLRS LTSSSSTSSS  120
MLSFDHLENC RSISNSTRLV PLSYSRPTEN ILDPNTDINS VQLSKEDLIM EEQLRWLYSA  180
ETTNSIDADK VQIRENDDGL LGATLKRPYM AIDDQMQVSK KQCTRGINKI SKQSSSVCKD  240
PQSIAAKNRR ERISERLKVL QELVPNGTKV DLVTMLEKAT SYVKFLQLQI KVLANDEFWQ  300
ENGGKKPEIG EMKEAIDAIL YSHNGPKSTS TSTTLLGERS KH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PB210.0A0A0K9PB21_Z
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141238117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.13e-48RHD SIX-LIKE 1